Physics
New way to read cells without killing them discovered
A team has found a method to study how cells change over time using living cells, which could lead to new insights into diseases and development.
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1 min read
In a breakthrough that sidesteps traditional methods' limitations, researchers Armbrust N and colleagues have developed Non-Destructive Transcriptomics via Vesicular Export (NTVE), a novel platform for monitoring RNA expression dynamics in living cells. This innovation enables the comprehensive characterization of cellular states without cell fixation or lysis, thereby allowing for longitudinal analysis of RNA expression.
The NTVE method relies on stabilized RNA reporter barcodes packaged and exported from cells using virus-like particles (VLPs) bearing bioorthogonal affinity handles. These VLPs selectively deliver the RNA barcodes to recipient cells, which can then be tracked in real-time, facilitating multichannel tracking of co-cultured cells. This approach is made possible by an engineered poly(A)-binding protein adapter that exports endogenous transcripts from inducible human and murine cell lines with high concordance to conventional lysate-derived RNA-seq.
NTVE's versatility extends beyond its ability to monitor RNA expression dynamics in response to genetic and chemical perturbations. The platform can also be equipped with fusogens to deliver mRNA-encoded effectors or ribonucleoprotein gene editors from sender cells, activating gene reporters in co-cultured recipient cells. This capability enables the development of novel tools for manipulating cellular behavior and studying complex biological processes.
As researchers like Armbrust N et al. push the boundaries of what is possible with NTVE, they are not only expanding our understanding of cellular biology but also opening doors to new avenues of inquiry. By harnessing the power of non-destructive transcriptomics, scientists can now monitor the dynamic interplay between different cell types in real-time, shedding light on complex biological processes and paving the way for novel therapeutic strategies. This innovation serves as a poignant reminder of the universe's intricate web of relationships, where even the smallest changes can have far-reaching consequences – a testament to the awe-inspiring complexity that underlies our existence.
1 min read
In a breakthrough that's been years in the making, scientists have discovered a way to study how cells change over time without harming them. This is no small feat, because most methods for understanding what cells are doing require fixing or killing them, which can't be done if we want to keep track of their behavior over days and weeks.
Imagine being able to watch a living cell's genetic instructions unfold like a tiny movie screen. That's basically what researchers have achieved with a new technique called non-destructive transcriptomics via vesicular export – or NTVE for short. By using special virus-like particles that can carry tiny markers through the cell, scientists can now collect snapshots of the cell's genetic activity without harming it.
This means we can finally study how cells respond to changes over time in ways that were previously impossible. The implications are huge: by understanding how our own cells behave in response to different treatments or stimuli, researchers might be able to develop new therapies for diseases like cancer or neurological disorders.
1 min read
In tiny vesicles, scientists have discovered a way to take a snapshot of what's happening inside living cells without harming them. This breakthrough, called non-destructive transcriptomics via vesicular export, lets researchers study how cells change over time without killing the cells.
Imagine taking a photo of your favorite bookshelf every day for a year. You can see how it changes, but you have to wait until you open the book to look inside. With this new method, scientists can do something similar with tiny vesicles that carry genetic information from living cells. They can then study how the genes are changing over time without harming the cells, which is a big deal because many previous methods required killing the cells first. This discovery could help us learn more about how our bodies work and how diseases develop.
The people behind the work
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Armbrust N et al.
Author
Published in Nature communications
Source: Nature communications
Sources & Verification
Every statement in this story is drawn from the facts below. Each is linked to a primary or reputable source — follow any citation to check it for yourself.
- Transcriptomics enables comprehensive, multiplexed characterization of cellular states, yet prevailing methods typically require cell fixation or lysis, precluding longitudinal analysis of RNA expression in living cells. Nature communications
- Here, we present non-destructive transcriptomics by vesicular export (NTVE), a platform for multi-time-point monitoring of RNA expression dynamics in living cells. Nature communications
- Stabilized RNA reporter barcodes can be selectively packaged and exported from cells via virus-like particles (VLPs) bearing bioorthogonal affinity handles for convenient multichannel tracking of co-cultured cells. Nature communications
- Using an engineered poly(A)-binding protein adapter, NTVE exports endogenous transcripts from inducible human and murine cell lines with high concordance to conventional lysate-derived RNA-seq. Nature communications
- NTVE captures transcriptome changes in response to genetic and chemical perturbations within the same cells over time using standard sequencing workflows. Nature communications
- NTVE can further be equipped with fusogens to deliver mRNA-encoded effectors or ribonucleoprotein gene editors from sender cells, activating gene reporters in co-cultured recipient cells. Nature communications
- We demonstrate the utility of NTVE for monitoring hiPSC differentiation through daily non-destructive transcriptomic profiling of lineage-specific marker dynamics. Nature communications
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